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Bug#922377: ITP: sibelia -- comparative genomics tool




Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille@xxxxxxxxxx>

* Package name    : sibelia
  Version         : 3.0.7
  Upstream Author : Saint-Petersburg Academic University
* URL             : http://bioinf.spbau.ru/sibelia
* License         : GPL-2
  Programming Lang: C
  Description     : comparative genomics tool
 Sibelia (Synteny Block ExpLoration tool) is a comparative genomics tool:
 It assists biologists in analysing the genomic variations that correlate
 with pathogens, or the genomic changes that help microorganisms adapt in
 different environments. Sibelia will also be helpful for the
 evolutionary and genome rearrangement studies for multiple strains of
 microorganisms.
 .
 Sibelia is useful in finding:
 .
  1) shared regions,
  2) regions that present in one group of genomes but not in others,
  3) rearrangements that transform one genome to other genomes.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/sibelia
The package also contained a binary JAR without source from snpEff.
Since the package is interesting also without the features provided
by this it was removed.  Hopefully snpEff will be packaged successfully
in Buster+1.