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Bug#900394: ITP: seqmagick -- imagemagick-like frontend to Biopython SeqIO




Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille@xxxxxxxxxx>

* Package name    : seqmagick
  Version         : 0.7.0
  Upstream Author : Matsen Group
* URL             : https://github.com/fhcrc/seqmagick/
* License         : GPL-3+
  Programming Lang: Python
  Description     : imagemagick-like frontend to Biopython SeqIO
 Seqmagick is a little utility to expose the file format conversion
 in BioPython in a convenient way.
 .
 Features include:
 .
  * Modifying sequences:
    - Remove gaps
    - Reverse & reverse complement
    - Trim to a range of residues
    - Change case
    - Sort by length or ID
  * Displaying information about sequence files
  * Subsetting sequence files by:
    - Position
    - ID
    - Deduplication
  * Filtering sequences by quality score
  * Trimming alignments to a region of interest defined by the forward
    and reverse primers

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/seqmagick