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Bug#875555: ITP: phast -- phylogenetic analysis with space/time models

Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille@xxxxxxxxxx>

* Package name    : phast
  Version         : 1.4
  Upstream Author : Ritika Ramani <rramani@xxxxxxxx>
* URL             : http://compgen.cshl/edu/phast
* License         : BSD
  Programming Lang: C
  Description     : phylogenetic analysis with space/time models
 PHAST is a software package for comparative and evolutionary genomics.
 It consists of about half a dozen major programs, plus more than a dozen
 utilities for manipulating sequence alignments, phylogenetic trees, and
 genomic annotations. For the most part, PHAST focuses on two kinds of
 applications: the identification of novel functional elements, including
 protein-coding exons and evolutionarily conserved sequences; and
 statistical phylogenetic modeling, including estimation of model
 parameters, detection of signatures of selection, and reconstruction of
 ancestral sequences.
 PHAST does not support phylogeny reconstruction or sequence alignment,
 and it is designed for use with DNA sequences only (see Comparison).

Remark: This package will be maintained by the Debian Med team at